Stem-loop oha-mir-16a

Accession

MI0031368

Description

Ophiophagus hannah oha-mir-16a precursor miRNA

Gene family

MIPF0000006; mir-15

Sequence

caguugugccuUAGCAGCAUAUAAAUAUUGGAGuuaucauuaguaaagugucuCCAGUAUCAGUUGUGCUGCUAAaguaaggcuguucu
(((((.(((.(((((((((((...(((((((((....((((.....)))).)))))))))....))))))))))).))).)))))....

Structure

----     g   c           -UAA         uuau    a 
    caguu ugc uUAGCAGCAUA    AUAUUGGAG    cauu g
    ||||| ||| |||||||||||    |||||||||    |||| u
    gucgg aug AAUCGUCGUGU    UAUGACCuc    guga a
ucuu     a   a           UGAC         ---u    a 

Annotation confidence Not enough data

Genome context

AZIM01002914.1: 113190-113278 [+]

Mature oha-miR-16a-5p

• Accession: MIMAT0036744
• Description: Ophiophagus hannah oha-miR-16a-5p mature miRNA
• Sequence: 12 - UAGCAGCAUAUAAAUAUUGGAG - 33
• Evidence: not_experimental

Mature oha-miR-16a-3p

• Accession: MIMAT0036745
• Description: Ophiophagus hannah oha-miR-16a-3p mature miRNA
• Sequence: 54 - CCAGUAUCAGUUGUGCUGCUAA - 75
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656