miRBase entry: oha-mir-148a

Stem-loop oha-mir-148a


Accession
MI0031361
Description
Ophiophagus hannah oha-mir-148a precursor miRNA
Gene family
MIPF0000056; mir-148


Sequence

gaaagAAAGUUCUGUGACACUUUGACUcugauuauaauagaagUCAGUGCACUACAGAACUUUCUcuucag
((((((((((((((((.((((..(((((((.......))).))))))))...))))))))))))).)))..

Structure
--   -             --A    UU    -   au 
  gaa agAAAGUUCUGUG   CACU  GACU cug  u
  ||| |||||||||||||   ||||  |||| |||  a
  cuu UCUUUCAAGACAU   GUGA  CUga gau  u
ga   c             CAC    --    a   aa 


Annotation confidence Not enough data
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Genome context
AZIM01002564.1: 331423-331493 [+]

Database links

Mature oha-miR-148a-5p

Accession MIMAT0036733
Description Ophiophagus hannah oha-miR-148a-5p mature miRNA
Sequence 6 - AAAGUUCUGUGACACUUUGACU - 27
Evidence not_experimental

Mature oha-miR-148a-3p

Accession MIMAT0036734
Description Ophiophagus hannah oha-miR-148a-3p mature miRNA
Sequence 44 - UCAGUGCACUACAGAACUUUCU - 65
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656