miRBase entry: oha-mir-144

Stem-loop oha-mir-144

Accession

MI0031357

Description

Ophiophagus hannah oha-mir-144 precursor miRNA

Gene family

MIPF0000093; mir-144

Sequence

uccagcucGGAUAUCAUCAUAUACUGUAAGUuggaaucagacacUACAGUAUAGAUGAUGUACUAucugg
.((((.....((((((((.(((((((((.((.(........)))))))))))))))))))).....))))

Structure

u    cucGG        A         A  u gaa 
 ccag     AUAUCAUC UAUACUGUA GU g   u
 ||||     |||||||| ||||||||| || |    
 gguc     UGUAGUAG AUAUGACAU ca c   c
-    uAUCA        -         -  - aga

Annotation confidence Not enough data

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Genome context

AZIM01003573.1: 17943-18012 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-144

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oha-miR-144-5p

Accession	MIMAT0036725
Description	Ophiophagus hannah oha-miR-144-5p mature miRNA
Sequence	9 - GGAUAUCAUCAUAUACUGUAAGU - 31
Evidence	not_experimental

Mature oha-miR-144-3p

Accession	MIMAT0036726
Description	Ophiophagus hannah oha-miR-144-3p mature miRNA
Sequence	45 - UACAGUAUAGAUGAUGUACUA - 65
Evidence	not_experimental

References

PubMed ID: 24297900
The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
"Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
"Proc Natl Acad Sci U S A (2013) 110:20651-20656