Stem-loop oha-mir-1388

Accession

MI0031351

Description

Ophiophagus hannah oha-mir-1388 precursor miRNA

Gene family

MIPF0000805; mir-1388

Sequence

caacugggggauguuucaAGGACUGUCUAACCUGAGAAUGgugacaccaaaagcucaAUCUCAGGUCCGUCAGCCCAUGagacguuccuucaagaa
.....(((((((((((((.((.(((.(..((((((((.((((..........)).)).))))))))..).))).)).)))))))))))))......

Structure

-caacu             A  A   U UA        A  -  gaca 
      gggggauguuuca GG CUG C  ACCUGAGA UG gu    c
      ||||||||||||| || ||| |  |||||||| || ||     
      uuccuugcagaGU CC GAC G  UGGACUCU ac cg    c
aagaac             A  C   U CC        A  u  aaaa 

Annotation confidence Not enough data

Genome context

AZIM01011697.1: 80-175 [-]

Mature oha-miR-1388-5p

• Accession: MIMAT0036713
• Description: Ophiophagus hannah oha-miR-1388-5p mature miRNA
• Sequence: 19 - AGGACUGUCUAACCUGAGAAUG - 40
• Evidence: not_experimental

Mature oha-miR-1388-3p

• Accession: MIMAT0036714
• Description: Ophiophagus hannah oha-miR-1388-3p mature miRNA
• Sequence: 58 - AUCUCAGGUCCGUCAGCCCAUG - 79
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656