miRBase entry: oha-mir-10b

Stem-loop oha-mir-10b


Accession
MI0031320
Description
Ophiophagus hannah oha-mir-10b precursor miRNA
Gene family
MIPF0000033; mir-10


Sequence

caucagucguuuauauaUACCCUGUAGAAUCGAAUUUGUGugagcaccucuauugCAAAUUCGUCUCUAGGGGGAUauauggaugaugcaaaaagcuu
.....(((((((((((((.((((.((((..((((((((((.(((...)))...))))))))))..)))).)))))))))))))))))((.....))..

Structure
------cauca             A    G    AU          --u   c 
           gucguuuauauaU CCCU UAGA  CGAAUUUGUG   gag  
           ||||||||||||| |||| ||||  ||||||||||   ||| a
           uaguagguauaUA GGGG AUCU  GCUUAAACgu   cuc  
uucgaaaaacg             -    G    CU          uau   c 


Annotation confidence Not enough data
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Genome context
AZIM01001075.1: 119644-119741 [+]

Database links

Mature oha-miR-10b-5p

Accession MIMAT0036662
Description Ophiophagus hannah oha-miR-10b-5p mature miRNA
Sequence 18 - UACCCUGUAGAAUCGAAUUUGUG - 40
Evidence not_experimental

Mature oha-miR-10b-3p

Accession MIMAT0036663
Description Ophiophagus hannah oha-miR-10b-3p mature miRNA
Sequence 56 - CAAAUUCGUCUCUAGGGGGAU - 76
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656