miRBase entry: oha-mir-10a

Stem-loop oha-mir-10a


Accession
MI0031319
Description
Ophiophagus hannah oha-mir-10a precursor miRNA
Gene family
MIPF0000033; mir-10


Sequence

aaggucucucugucuucuguaugUACCCUGUAGAUCCGAAUUUGUGuaaaagaagcugucucaCAAAUUCGCAUCUAGGGGAAUAuguaguugacacaaacccuacggagcg
.(((......((((..((((((((.((((.(((((.((((((((((....((...))....)))))))))).))))))))).))))))))..)))).....)))........

Structure
-------a   ucucuc    uu        A    G     C          uaaa  a 
        agg      uguc  cuguaugU CCCU UAGAU CGAAUUUGUG    ag  
        |||      ||||  |||||||| |||| ||||| ||||||||||    || a
        ucc      acag  gauguAUA GGGG AUCUA GCUUAAACac    uc  
gcgaggca   -caaac    uu        A    -     C          ucug  g 


Annotation confidence Not enough data
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Genome context
AZIM01000025.1: 195141-195252 [-]

Database links

Mature oha-miR-10a-5p

Accession MIMAT0036660
Description Ophiophagus hannah oha-miR-10a-5p mature miRNA
Sequence 24 - UACCCUGUAGAUCCGAAUUUGUG - 46
Evidence not_experimental

Mature oha-miR-10a-3p

Accession MIMAT0036661
Description Ophiophagus hannah oha-miR-10a-3p mature miRNA
Sequence 64 - CAAAUUCGCAUCUAGGGGAAUA - 85
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656