miRBase entry: oha-mir-107

Stem-loop oha-mir-107


Accession
MI0031316
Description
Ophiophagus hannah oha-mir-107 precursor miRNA
Gene family
MIPF0000024; mir-103


Sequence

cucuuugcuuucAGCUUCUUUACAGUGUUGCCUUGUggcauggaguucaAGCAGCAUUGUACAGGGCUAUCAaagcaua
.....((((((.((((.((.(((((((((((.(((.(((.....))))))))))))))))).))))))...))))))..

Structure
cucuu      --c    U  U           C   U   a 
     ugcuuu   AGCU CU UACAGUGUUGC UUG ggc u
     ||||||   |||| || ||||||||||| ||| ||| g
     acgaaA   UCGG GA AUGUUACGACG Aac uug g
---au      CUA    -  C           -   -   a 


Annotation confidence Not enough data
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Genome context
AZIM01001029.1: 157003-157081 [+]

Database links

Mature oha-miR-107-5p

Accession MIMAT0036654
Description Ophiophagus hannah oha-miR-107-5p mature miRNA
Sequence 13 - AGCUUCUUUACAGUGUUGCCUUGU - 36
Evidence not_experimental

Mature oha-miR-107-3p

Accession MIMAT0036655
Description Ophiophagus hannah oha-miR-107-3p mature miRNA
Sequence 50 - AGCAGCAUUGUACAGGGCUAUCA - 72
Evidence not_experimental

References

  1. PubMed ID: 24297900
    The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
    "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
    "Proc Natl Acad Sci U S A (2013) 110:20651-20656