Stem-loop ggo-mir-516b-2

Accession

MI0031095

Description

Gorilla gorilla ggo-mir-516b-2 precursor miRNA

Gene family

MIPF0000020; mir-515

Sequence

gcuggagcaagaagaucucgugaugugaccAUCUGGAGGUAAGAAGCACUUucuguuuugugaaagaaaagaaagugcuuccucucagaggguuacucuuugagaaaagcagcauugaa
((((...........(((((.((.((((((.((((((((....(((((((((((.((((.....)))).))))))))))))))).)))).))))))))..)))))....))))......

Structure

------    gagcaagaaga     -u  u      A    -    UAAG           g    g 
      gcug           ucucg  ga gugacc UCUG GAGG    AAGCACUUucu uuuu u
      ||||           |||||  || |||||| |||| ||||    ||||||||||| |||| g
      cgac           agagu  cu cauugg agac cucc    uucgugaaaga aaga a
aaguua    -------gaaa     uu  -      g    u    ----           a    a 

Annotation confidence Not enough data

Genome context

chr19: 53068474-53068592 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from ggo-mir-516b-2

Mature ggo-miR-516b

• Accession: MIMAT0024292
• Description: Gorilla gorilla ggo-miR-516b mature miRNA
• Sequence: 31 - AUCUGGAGGUAAGAAGCACUU - 51
• Evidence: not_experimental

References

1. PubMed ID: 24126940
   Exploration of miRNA families for hypotheses generation
   "Kamanu TK, Radovanovic A, Archer JA, Bajic VB"
   "Sci Rep (2013) 3:2940