miRBase entry: ggo-mir-1283-1

Stem-loop ggo-mir-1283-1


Accession
MI0031084
Description
Gorilla gorilla ggo-mir-1283-1 precursor miRNA
Gene family
MIPF0000020; mir-515


Sequence

ugcuggagcaagaagaucucaggcugugacuCUGCAAAGGGAAGCCCUUUCuguugucagaaagaaaagaaagcgcuucccuuugcuggguuacgguuugagaaagcgacguugaaguug
(((....)))......((((((((((((((((.((((((((((((.((((((....((.....))..)))))).)))))))))))).))))))))))))))))...((((......))))

Structure
-ugcuggagcaagaaga                U            C      guug  a 
                 ucucaggcugugacuC GCAAAGGGAAGC CUUUCu    uc g
                 |||||||||||||||| |||||||||||| ||||||    || a
                 agaguuuggcauuggg cguuucccuucg gaaaga    ag a
guugaaguugcagcgaa                u            c      --aa  a 


Annotation confidence Not enough data
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Genome context
chr19: 53081305-53081424 [+]
Clustered miRNAs
4 other miRNAs are < 10 kb from ggo-mir-1283-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ggo-miR-1283

Accession MIMAT0036431
Description Gorilla gorilla ggo-miR-1283 mature miRNA
Sequence 32 - CUGCAAAGGGAAGCCCUUUC - 51
Evidence not_experimental

References

  1. PubMed ID: 24126940
    Exploration of miRNA families for hypotheses generation
    "Kamanu TK, Radovanovic A, Archer JA, Bajic VB"
    "Sci Rep (2013) 3:2940