Stem-loop ggo-mir-518e

Accession

MI0031082

Description

Gorilla gorilla ggo-mir-518e precursor miRNA

Gene family

MIPF0000020; mir-515

Sequence

caagaucucaggcugugaccCUCUAGAGGGAAGCGCUUUCUGuuggcuaaaagaaaagAAAGCGCUUCCCUUCAGAGUGuuacgcuuugagaaaagca
.....((((((((.(((((.((((.((((((((((((((((...............)))))))))))))))).)))).))))))).))))))......

Structure

-caaga      -  u     c    A                Guuggc 
      ucucag gc gugac CUCU GAGGGAAGCGCUUUCU      u
      |||||| || ||||| |||| ||||||||||||||||      a
      agaguu cg cauuG GAGA UUCCCUUCGCGAAAga      a
acgaaa      u  -     U    C                aaagaa 

Annotation confidence Not enough data

Genome context

chr19: 53073319-53073416 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from ggo-mir-518e

Mature ggo-miR-518e-5p

• Accession: MIMAT0036427
• Description: Gorilla gorilla ggo-miR-518e-5p mature miRNA
• Sequence: 21 - CUCUAGAGGGAAGCGCUUUCUG - 42
• Evidence: not_experimental

Mature ggo-miR-518e-3p

• Accession: MIMAT0036428
• Description: Gorilla gorilla ggo-miR-518e-3p mature miRNA
• Sequence: 59 - AAAGCGCUUCCCUUCAGAGUG - 79
• Evidence: not_experimental

References

1. PubMed ID: 24126940
   Exploration of miRNA families for hypotheses generation
   "Kamanu TK, Radovanovic A, Archer JA, Bajic VB"
   "Sci Rep (2013) 3:2940