miRBase entry: ggo-mir-524

Stem-loop ggo-mir-524

Accession

MI0031079

Description

Gorilla gorilla ggo-mir-524 precursor miRNA

Gene family

MIPF0000020; mir-515

Sequence

cuggagcaagaagaucucaugcugugaccCUACAAAGGGAAGCACUUUCUCuuguccaaaggaaaaGAAGGCGCUUCCCUUUGGAGUguuacgguuugagaaaagc
..............(((((.((((((((.((.(((((((((((.((((((....(((...)))..)))))).))))))))))).)).)))))))).))))).....

Structure

cuggagcaagaaga     u        c  A           A      Cuug   a 
              ucuca gcugugac CU CAAAGGGAAGC CUUUCU    ucc  
              ||||| |||||||| || ||||||||||| ||||||    ||| a
              agagu uggcauug GA GUUUCCCUUCG GGAAGa    agg  
---------cgaaa     u        U  G           C      --aa   a

Annotation confidence Not enough data

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Genome context

chr19: 53053465-53053570 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from ggo-mir-524

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-miR-524-5p

Accession	MIMAT0036423
Description	Gorilla gorilla ggo-miR-524-5p mature miRNA
Sequence	30 - CUACAAAGGGAAGCACUUUCUC - 51
Evidence	not_experimental

Mature ggo-miR-524-3p

Accession	MIMAT0036424
Description	Gorilla gorilla ggo-miR-524-3p mature miRNA
Sequence	67 - GAAGGCGCUUCCCUUUGGAGU - 87
Evidence	not_experimental

References

PubMed ID: 24126940
Exploration of miRNA families for hypotheses generation
"Kamanu TK, Radovanovic A, Archer JA, Bajic VB"
"Sci Rep (2013) 3:2940