miRBase entry: ggo-mir-518c

Stem-loop ggo-mir-518c


Accession
MI0031078
Description
Gorilla gorilla ggo-mir-518c precursor miRNA
Gene family
MIPF0000020; mir-515


Sequence

uggagcgagaagaucucaugcugugacUCUCUGGAGGGAAGCACUUUCUGuugucugaaagaaaaCAAAGCGCUUCUCUUUAGAGUGUuacgguuugagaaaagcaacguugaaguug
.............(((((.((((((((.((((((((((((((.(((..((((.(((...))).))))))).)))))))))))))).)))))))).)))))....((((......))))

Structure
-----uggagcgagaaga     u        U              A   UC    g   g 
                  ucuca gcugugac CUCUGGAGGGAAGC CUU  UGuu ucu  
                  ||||| |||||||| |||||||||||||| |||  |||| ||| a
                  agagu uggcauUG GAGAUUUCUCUUCG GAA  ACaa aga  
guugaaguugcaacgaaa     u        U              C   --    a   a 


Annotation confidence Not enough data
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Genome context
chr19: 53051189-53051306 [+]
Clustered miRNAs
8 other miRNAs are < 10 kb from ggo-mir-518c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ggo-miR-518c-5p

Accession MIMAT0036421
Description Gorilla gorilla ggo-miR-518c-5p mature miRNA
Sequence 28 - UCUCUGGAGGGAAGCACUUUCUG - 50
Evidence not_experimental

Mature ggo-miR-518c-3p

Accession MIMAT0036422
Description Gorilla gorilla ggo-miR-518c-3p mature miRNA
Sequence 66 - CAAAGCGCUUCUCUUUAGAGUGU - 88
Evidence not_experimental

References

  1. PubMed ID: 24126940
    Exploration of miRNA families for hypotheses generation
    "Kamanu TK, Radovanovic A, Archer JA, Bajic VB"
    "Sci Rep (2013) 3:2940