miRBase entry: ggo-mir-523

Stem-loop ggo-mir-523

Accession

MI0031073

Description

Gorilla gorilla ggo-mir-523 precursor miRNA

Gene family

MIPF0000020; mir-515

Sequence

cuggagcaagaagaucucaugcugugaccCUCUAGAGGGAAGCGCUUUCUGuugucugaaagaaaaGAACGCGCUUCCCUAUAGAGGGUuacccuuugagaaaagcagcauugaaguug
..............(((((....(((((((((((.((((((((((.((((....(((...)))..)))).)))))))))).)))))))))))....)))))....((((......))))

Structure

----cuggagcaagaaga     ugcu           G          U    Guug   g 
                  ucuca    gugaccCUCUA AGGGAAGCGC UUCU    ucu  
                  |||||    ||||||||||| |||||||||| ||||    ||| a
                  agagu    cauUGGGAGAU UCCCUUCGCG AAGa    aga  
guugaaguuacgacgaaa     uucc           A          C    --aa   a

Annotation confidence Not enough data

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Genome context

chr19: 53042042-53042160 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from ggo-mir-523

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ggo-miR-523-5p

Accession	MIMAT0036414
Description	Gorilla gorilla ggo-miR-523-5p mature miRNA
Sequence	30 - CUCUAGAGGGAAGCGCUUUCUG - 51
Evidence	not_experimental

Mature ggo-miR-523-3p

Accession	MIMAT0036415
Description	Gorilla gorilla ggo-miR-523-3p mature miRNA
Sequence	67 - GAACGCGCUUCCCUAUAGAGGGU - 89
Evidence	not_experimental

References

PubMed ID: 24126940
Exploration of miRNA families for hypotheses generation
"Kamanu TK, Radovanovic A, Archer JA, Bajic VB"
"Sci Rep (2013) 3:2940