miRBase entry: ggo-mir-520f

Stem-loop ggo-mir-520f


Accession
MI0031069
Description
Gorilla gorilla ggo-mir-520f precursor miRNA
Gene family
MIPF0000020; mir-515


Sequence

caggcugugacccucuaaagggaagcgcuuucuguggucagaaagaaaagcAAGUGCUUCCUUUUAGAGGGUUaccguuugggaaaagcaauguugaag
(((((.((((((((((((((((((((((((((((....)))).........)))))))))))))))))))))))).)))))..................

Structure
------------------     u                        ---------    u 
                  caggc gugacccucuaaagggaagcgcuu         ucug g
                  ||||| ||||||||||||||||||||||||         ||||  
                  guuug caUUGGGAGAUUUUCCUUCGUGAA         agac g
gaaguuguaacgaaaagg     c                        cgaaaagaa    u 


Annotation confidence Not enough data
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Genome context
chr19: 53025391-53025489 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from ggo-mir-520f
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ggo-miR-520f

Accession MIMAT0036409
Description Gorilla gorilla ggo-miR-520f mature miRNA
Sequence 52 - AAGUGCUUCCUUUUAGAGGGUU - 73
Evidence not_experimental

References

  1. PubMed ID: 24126940
    Exploration of miRNA families for hypotheses generation
    "Kamanu TK, Radovanovic A, Archer JA, Bajic VB"
    "Sci Rep (2013) 3:2940