miRBase entry: gma-MIR9756

Stem-loop gma-MIR9756


Accession
MI0031049
Description
Glycine max gma-MIR9756 precursor miRNA


Sequence

cuauggcccuguuuggguaaaguucucaauaagcacuuauaggaaaagaaauaacaaguuaaaaugaauuaagcuuaucccacaaguuaaauuagcuuuuggaaaaaaaugaaaaaacuuccauaaauuagcuuauacauaaacuaauuuuaacuuaugagggaaguuuaaaucauuuucuaucuauuuucuucuuuuacaagugcucauUGAGAACUUUAUCCAAACAGAGcaaua
.....((.((((((((((((((((((((((.(((((((.(((((.((((((.........(((((((.((((((((.(((((.((((((((..((((..(((((..............)))))......))))...............)))))))).)).))))))))))).)))))))........)))))).))))).))))))).)))))))))))))))))))))).))....

Structure
cuaug  c                      a       a     a      uaacaaguu       a        a   -  c        -------------uu    ----uu     aaaaau 
     gc cuguuuggguaaaguucucaau agcacuu uagga aagaaa         aaaauga uuaagcuu ucc ca aaguuaaa               agcu      uggaa      g
     || |||||||||||||||||||||| ||||||| ||||| ||||||         ||||||| |||||||| ||| || ||||||||               ||||      |||||       
     cG GACAAACCUAUUUCAAGAGUua ucgugaa auuuu uucuuu         uuuuacu aauuugaa ggg gu uucaauuu               ucga      accuu      a
-auaa  A                      c       c     c      -uaucuauc       a        -   a  a        uaaucaaauacauau    uuaaau     caaaaa 


Annotation confidence Not enough data
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Genome context
chr18: 43318601-43318837 [+]

Database links

Mature gma-miR9756

Accession MIMAT0036387
Description Glycine max gma-miR9756 mature miRNA
Sequence 211 - UGAGAACUUUAUCCAAACAGAG - 232
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 24475082
    Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
    Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
    PLoS One (2014) 9:e86153

  2. PubMed ID: 25465409
    An atlas of soybean small RNAs identifies phased siRNAs from hundreds of coding genes
    "Arikit S, Xia R, Kakrana A, Huang K, Zhai J, Yan Z, Valdes-Lopez O, Prince S, Musket TA, Nguyen HT, Stacey G, Meyers BC"
    "Plant Cell (2014) 26:4584-4601