miRBase entry: ocu-mir-302d

Stem-loop ocu-mir-302d


Accession
MI0030990
Description
Oryctolagus cuniculus ocu-mir-302d precursor miRNA
Gene family
MIPF0000071; mir-302

Literature search
1 open access papers mention ocu-mir-302d
(1 sentences)

Sequence

ucucuACUUUAACAUGGAGGCACUUGCugugccaugauaaaaaUAAGUGCUUCCAUGUUUGAGUGUgg
....(((((.((((((((((((((((.(((......)))....)))))))))))))))).)))))...

Structure
ucuc     U                ---C   gc 
    uACUU AACAUGGAGGCACUUG    ugu  c
    ||||| ||||||||||||||||    |||   
    GUGAG UUGUACCUUCGUGAAU    aua  a
-ggU     U                aaaa   gu 


Annotation confidence Not enough data
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Genome context
CM000804.1: 36770109-36770176 [+]
Clustered miRNAs
4 other miRNAs are < 10 kb from ocu-mir-302d
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ocu-miR-302d-5p

Accession MIMAT0036322
Description Oryctolagus cuniculus ocu-miR-302d-5p mature miRNA
Sequence 6 - ACUUUAACAUGGAGGCACUUGC - 27
Evidence experimental
SOLiD [1]

Mature ocu-miR-302d-3p

Accession MIMAT0036323
Description Oryctolagus cuniculus ocu-miR-302d-3p mature miRNA
Sequence 44 - UAAGUGCUUCCAUGUUUGAGUGU - 66
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 23426804
    Discovery of pluripotency-associated microRNAs in rabbit preimplantation embryos and embryonic stem-like cells
    "Maraghechi P, Hiripi L, Toth G, Bontovics B, Bosze Z, Gocza E"
    "Reproduction (2013) 145:421-437