miRBase entry: chi-mir-93

Stem-loop chi-mir-93


Accession
MI0030841
Description
Capra hircus chi-mir-93 precursor miRNA
Gene family
MIPF0000001; mir-17

Literature search
2 open access papers mention chi-mir-93
(2 sentences)

Sequence

cugggggcucCAAAGUGCUGUUCGUGCAGGUAGugugaucaccugaccuACUGCUGAGCCAGCACUUCCCGAgccc
....((((((..((((((((((((.((((.(((.((.(.....).))))))))))))).))))))))...))))))

Structure
cugg      -CA        -    U    G   u  g u 
    gggcuc   AAGUGCUG UUCG GCAG UAG gu a c
    ||||||   |||||||| |||| |||| ||| || | a
    cccgAG   UUCACGAC GAGU CGUC Auc ca u c
----      CCC        C    -    -   -  g c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature chi-miR-93-5p

Accession MIMAT0036305
Description Capra hircus chi-miR-93-5p mature miRNA
Sequence 11 - CAAAGUGCUGUUCGUGCAGGUAG - 33
Evidence experimental
Illumina [1]

Mature chi-miR-93-3p

Accession MIMAT0036306
Description Capra hircus chi-miR-93-3p mature miRNA
Sequence 50 - ACUGCUGAGCCAGCACUUCCCGA - 72
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40