miRBase entry: chi-mir-873

Stem-loop chi-mir-873


Accession
MI0030835
Description
Capra hircus chi-mir-873 precursor miRNA
Gene family
MIPF0000390; mir-873

Literature search
1 open access papers mention chi-mir-873
(1 sentences)

Sequence

uaaguuugugugcauuUGCAGGAACUUGUGAGUCUccuauugaacaugaacagGAGGCUGAUGAGUUCCCGGGAAcacccacaaaucuuccuacucauu
...(((((((.(..(((.(.(((((((((.((((((((.((.......)).)))))))).))))))))).).)))..).))))))).............

Structure
----------uaa       u ca   G A         G        a  ga 
             guuugug g  uuU C GGAACUUGU AGUCUccu uu  a
             ||||||| |  ||| | ||||||||| |||||||| ||  c
             uaaacac c  AAG G CCUUGAGUA UCGGAGga aa  a
uuacucauccuuc       c ac   G C         G        c  gu 


Annotation confidence Not enough data
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Genome context
chr8: 15366430-15366528 [+]

Database links

Mature chi-miR-873-5p

Accession MIMAT0036294
Description Capra hircus chi-miR-873-5p mature miRNA
Sequence 17 - UGCAGGAACUUGUGAGUCU - 35
Evidence experimental
Illumina [1]

Mature chi-miR-873-3p

Accession MIMAT0036295
Description Capra hircus chi-miR-873-3p mature miRNA
Sequence 54 - GAGGCUGAUGAGUUCCCGGGAA - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40