Stem-loop sequence chi-mir-493

Accession

MI0030807 (change log)

Description

Capra hircus miR-493 stem-loop

Gene family

MIPF0000230; mir-493

Literature search

5 open access papers mention chi-mir-493
(16 sentences)

Stem-loop

   ----ggggcucccucuggcccc        u                    cauuc  u 
5'                       cagggccu guacaugguaggcuuucauu     gu u
                         |||||||| ||||||||||||||||||||     ||  
3'                       gucccgga cgugugucaucuggaagugg     ca g
   agguaaaugaacgacggaccgu        c                    -cuua  c 

Confidence

Annotation confidence: not enough data

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Genome context

Coordinates (CHIR_2.0; GCA_000317765.2)	Overlapping transcripts
chr21: 66936079-66936193 [+]	intergenic
chr21: 66941247-66941361 [+]	intergenic

Database links

• miRBase Tracker:MI0030807

Mature sequence chi-miR-493-5p

• Accession: MIMAT0036253
• Sequence: 26 - uuguacaugguaggcuuucauu - 47
• Evidence: experimental; Illumina [1]

Mature sequence chi-miR-493-3p

• Accession: MIMAT0036254
• Sequence: 67 - ugaaggucuacugugugccagg - 88
• Evidence: experimental; Illumina [1]

References

1. PMID:23981187 "Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing" Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J Reprod Domest Anim. 49:32-40(2014).