Stem-loop sequence chi-mir-449c

AccessionMI0030796 (change log)
DescriptionCapra hircus miR-449c stem-loop
Gene family MIPF0000133; mir-449
Literature search

1 open access papers mention chi-mir-449c
(1 sentences)

Stem-loop
   --aagcu        uca  ua  c      ucu     u         uau 
5'        ugaaugug   gg  gg agugca   cuagc ggcuguuaa   u
          ||||||||   ||  || ||||||   ||||| |||||||||   u
3'        acuuacgu   uc  cc ucacgu   gaucg uugacaauu   c
   uucuaau        -ug  gc  c      --u     -         uua 
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (CHIR_2.0; GCA_000317765.2) Overlapping transcripts
chr20: 24945519-24945619 [+]
intergenic
Clustered miRNAs
< 10kb from chi-mir-449c
chi-mir-449cchr20: 24945519-24945619 [+]
chi-mir-449bchr20: 24946735-24946831 [+]
chi-mir-449achr20: 24946859-24946946 [+]
Database links

Mature sequence chi-miR-449c

Accession MIMAT0036234
Sequence

20 - 

aggcagugcaucucuagcu

 - 38

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:23981187 "Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing" Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J Reprod Domest Anim. 49:32-40(2014).