miRBase entry: chi-mir-423

Stem-loop chi-mir-423


Accession
MI0030788
Description
Capra hircus chi-mir-423 precursor miRNA
Gene family
MIPF0000329; mir-423

Literature search
2 open access papers mention chi-mir-423
(4 sentences)

Sequence

acuugugaggaaauaaaggaaguuaggcUGAGGGGCAGAGAGCGAGACUUUucuauuuuccaaaAGCUCGGUCUGAGGCCCCUCAGUcuugcuuccuaccccgcgcuugaguuucucccc
(((((((.((......(((((((.((((((((((((..(((.((((.(((((.........))))))))).)))...)))))))))))).)))))))...)).)))..))))........

Structure
--------    --   a  aaauaa       u            -AG   G    A     cua 
        acuu  gug gg      aggaagu aggcUGAGGGGC   AGA CGAG CUUUu   u
        ||||  ||| ||      ||||||| ||||||||||||   ||| |||| |||||   u
        ugag  cgc cc      uccuucg ucUGACUCCCCG   UCU GCUC GAaaa   u
ccccucuu    uu   g  ---cca       u            GAG   G    -     ccu 


Annotation confidence Not enough data
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Genome context
chr19: 21574266-21574385 [+]

Database links

Mature chi-miR-423-5p

Accession MIMAT0036220
Description Capra hircus chi-miR-423-5p mature miRNA
Sequence 29 - UGAGGGGCAGAGAGCGAGACUUU - 51
Evidence experimental
Illumina [1]

Mature chi-miR-423-3p

Accession MIMAT0036221
Description Capra hircus chi-miR-423-3p mature miRNA
Sequence 65 - AGCUCGGUCUGAGGCCCCUCAGU - 87
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40