Stem-loop chi-mir-374a

Accession

MI0030765

Description

Capra hircus chi-mir-374a precursor miRNA

Gene family

MIPF0000288; mir-374

Literature search

1 open access papers mention chi-mir-374a
(1 sentences)

Sequence

cuggagcagcgcccccuggaagugaauuuuacaucggccaUUAUAAUACAACCUGAUAAGUguuacagcaCUUAUCAGGUUGUAUUGUAAUUgucuguguauaugccuguc
.....((((.((((...))..........(((((.(((.((((((((((((((((((((((((....)))))))))))))))))))))))).))).)))))...)))))).

Structure

cugga    c  ccccuggaagugaauuu     c   c                        u 
     gcag gc                 uacau ggc aUUAUAAUACAACCUGAUAAGUgu a
     |||| ||                 ||||| ||| ||||||||||||||||||||||||  
     uguc cg                 augug cug UAAUGUUAUGUUGGACUAUUCacg c
----c    -  --------------uau     u   U                        a 

Annotation confidence Not enough data

Genome context

chrX: 72713757-72713867 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from chi-mir-374a

Mature chi-miR-374a-5p

• Accession: MIMAT0036180
• Description: Capra hircus chi-miR-374a-5p mature miRNA
• Sequence: 41 - UUAUAAUACAACCUGAUAAGU - 61
• Evidence: experimental ; Illumina [1]

Mature chi-miR-374a-3p

• Accession: MIMAT0036181
• Description: Capra hircus chi-miR-374a-3p mature miRNA
• Sequence: 71 - CUUAUCAGGUUGUAUUGUAAUU - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40