miRBase entry: chi-mir-363

Stem-loop chi-mir-363


Accession
MI0030762
Description
Capra hircus chi-mir-363 precursor miRNA
Gene family
MIPF0000138; mir-363

Literature search
1 open access papers mention chi-mir-363
(27 sentences)

Sequence

uuguaaaaugaccuguuuugcuguuguCGGGUGGAUCACGAUGCAAUUUugauuaguauaauaggagaaaAAUUGCACGGUAUCCAUCUGCGaaccgcaggacccuuguug
..............(((((((.(((..(((((((((..((.(((((((((..(((......)))....)))))))))))..)))))))))..))).)))))))........

Structure
uuguaaaaugaccu       u   gu         CA  A         --ga   gu 
              guuuugc guu  CGGGUGGAU  CG UGCAAUUUu    uua  a
              ||||||| |||  |||||||||  || |||||||||    |||   
              caggacg caa  GUCUACCUA  GC ACGUUAAaa    gau  u
------guuguucc       c   GC         UG  -         agag   aa 


Annotation confidence Not enough data
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Genome context
chrX: 40074650-40074760 [-]
Clustered miRNAs
4 other miRNAs are < 10 kb from chi-mir-363
Name Accession Chromosome Start End Strand Confidence




Database links

Mature chi-miR-363-5p

Accession MIMAT0036175
Description Capra hircus chi-miR-363-5p mature miRNA
Sequence 28 - CGGGUGGAUCACGAUGCAAUUU - 49
Evidence experimental
Illumina [1]

Mature chi-miR-363-3p

Accession MIMAT0036176
Description Capra hircus chi-miR-363-3p mature miRNA
Sequence 71 - AAUUGCACGGUAUCCAUCUGCG - 92
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40