miRBase entry: chi-mir-362

Stem-loop chi-mir-362


Accession
MI0030761
Description
Capra hircus chi-mir-362 precursor miRNA
Gene family
MIPF0000209; mir-362

Literature search
1 open access papers mention chi-mir-362
(1 sentences)

Sequence

gagccuucuugucugcucccccucucgAAUCCUUGGAACCUAGGUGUGAGUgcugcucuagugcAACACACCUAUUCAAGGAUUCaaagaggcugagc
..............((((..(((((.(((((((((((...((((((((.((((((...))))))..)))))))))))))))))))..)))))..))))

Structure
gagccuucuugucu    cc     -c           ACC        -A      c 
              gcuc  ccucu  gAAUCCUUGGA   UAGGUGUG  GUgcug  
              ||||  |||||  |||||||||||   ||||||||  |||||| u
              cgag  ggaga  CUUAGGAACUU   AUCCACAC  cgugau  
--------------    uc     aa           ---        AA      c 


Annotation confidence Not enough data
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Genome context
chrX: 82604414-82604511 [-]
Clustered miRNAs
4 other miRNAs are < 10 kb from chi-mir-362
Name Accession Chromosome Start End Strand Confidence




Database links

Mature chi-miR-362-5p

Accession MIMAT0036173
Description Capra hircus chi-miR-362-5p mature miRNA
Sequence 28 - AAUCCUUGGAACCUAGGUGUGAGU - 51
Evidence experimental
Illumina [1]

Mature chi-miR-362-3p

Accession MIMAT0036174
Description Capra hircus chi-miR-362-3p mature miRNA
Sequence 65 - AACACACCUAUUCAAGGAUUC - 85
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40