Stem-loop sequence chi-mir-342

AccessionMI0030752 (change log)
DescriptionCapra hircus miR-342 stem-loop
Gene family MIPF0000190; mir-342
Literature search

1 open access papers mention chi-mir-342
(2 sentences)

Stem-loop 
   ----     c  g      --ua      gu    g   c gcaa 
5'     cgagg ga gggugc    ucugug  ugag aca g    a
       ||||| || ||||||    ||||||  |||| ||| |     
3'     gcucc cu cccacg    agacac  acuc ugu c    u
   cccg     u  a      cuaa      --    -   - aagg
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (CHIR_2.0; GCA_000317765.2) Overlapping transcripts
chr21: 66158564-66158645 [+]
intergenic
Database links

Mature sequence chi-miR-342-5p

Accession MIMAT0036157
Sequence

8 -  

aggggugcuaucugugguugagg

 - 30

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Evidence experimental; Illumina [1]

Mature sequence chi-miR-342-3p

Accession MIMAT0036158
Sequence

49 -  

ucucacacagaaaucgcaccca

 - 70

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:23981187 "Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing" Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J Reprod Domest Anim. 49:32-40(2014).