miRBase entry: chi-mir-329b

Stem-loop chi-mir-329b


Accession
MI0030744
Description
Capra hircus chi-mir-329b precursor miRNA
Gene family
MIPF0000110; mir-329

Literature search
1 open access papers mention chi-mir-329b
(1 sentences)

Sequence

cacugguguucuggucaguguucacccaugguaccugaagagagguuuucuggguuucuguuucuuuaaugaggaugaAACACACCUGGUUAACCUCUuuuccaguaucaaaucccaucuugaa
....((((..(........)..))))..((((((..(((((((((((..((((((...((((((.((......)).)))))).))))))..)))))))))))..))))))..............

Structure
cacugguguucuggucaguguucaccca      cu           uu      uuc      u  aa 
                            ugguac  gaagagagguu  cugggu   uguuuc uu  u
                            ||||||  |||||||||||  ||||||   |||||| ||   
                            acuaug  cuuuUCUCCAA  GGUCCA   ACAAag ag  g
--------------aaguucuacccuaa      ac           UU      --C      u  ga 


Annotation confidence Not enough data
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Genome context
chr21: 67105074-67105197 [+]
Clustered miRNAs
12 other miRNAs are < 10 kb from chi-mir-329b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature chi-miR-329b-3p

Accession MIMAT0036142
Description Capra hircus chi-miR-329b-3p mature miRNA
Sequence 79 - AACACACCUGGUUAACCUCU - 98
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40