Stem-loop sequence chi-mir-29a

Accession

MI0030726 (change log)

Description

Capra hircus miR-29a stem-loop

Gene family

MIPF0000009; mir-29

Literature search

8 open access papers mention chi-mir-29a
(22 sentences)

Stem-loop

   -    uuagagg            uuu       c    ucaa 
5'  cccc       augacugauuuc   ugguguu agag    u
    ||||       ||||||||||||   ||||||| ||||    a
3'  gggg       uauuggcuaaag   accacga ucuu    u
   a    uuaguaa            ucu       -    uuaa 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (CHIR_2.0; GCA_000317765.2): chr4: 97291653-97291739 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0030726

Mature sequence chi-miR-29a-5p

• Accession: MIMAT0036112
• Sequence: 15 - acugauuucuuuugguguuca - 35
• Evidence: experimental; Illumina [1]

Mature sequence chi-miR-29a-3p

• Accession: MIMAT0036113
• Sequence: 53 - uagcaccaucugaaaucgguu - 73
• Evidence: experimental; Illumina [1]

References

1. PMID:23981187 "Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing" Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J Reprod Domest Anim. 49:32-40(2014).