miRBase entry: chi-mir-28

Stem-loop chi-mir-28


Accession
MI0030724
Description
Capra hircus chi-mir-28 precursor miRNA
Gene family
MIPF0000057; mir-28


Sequence

gguccuugcccucAAGGAGCUCACAGUCUAUUGAguugccuuucugacuuuccCACUAGAUUGAGAGCUCCUGGAgggcaggcacu
(((.(((((((((.((((((((.(((((((.((((((........))))....)).))))))).)))))))).))))))))).)))

Structure
   c         A        A       U  ----    gcc 
ggu cuugcccuc AGGAGCUC CAGUCUA UG    Aguu   u
||| ||||||||| |||||||| ||||||| ||    ||||    
uca ggacgggAG UCCUCGAG GUUAGAU AC    ucag   u
   c         G        A       C  ccuu    ucu 


Annotation confidence Not enough data
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Genome context
chr1: 80630274-80630359 [-]

Database links

Mature chi-miR-28-5p

Accession MIMAT0036109
Description Capra hircus chi-miR-28-5p mature miRNA
Sequence 14 - AAGGAGCUCACAGUCUAUUGA - 34
Evidence experimental
Illumina [1]

Mature chi-miR-28-3p

Accession MIMAT0036110
Description Capra hircus chi-miR-28-3p mature miRNA
Sequence 54 - CACUAGAUUGAGAGCUCCUGGA - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40