Stem-loop chi-mir-26b

Accession

MI0030721

Description

Capra hircus chi-mir-26b precursor miRNA

Gene family

MIPF0000043; mir-26

Literature search

4 open access papers mention chi-mir-26b
(4 sentences)

Sequence

acccugcccgggacccagUUCAAGUAAUUCAGGAUAGGUUgugugcuguccagCCUGUUCUCCAUUACUUGGCUCgggggccggugcccugcagccuuggggugaggg
.....((((((..((((((.((((((((..(((((((((((.(......))))))))))))..))))))))))).)))..)))).))(((.((.((...)).))))).

Structure

----------------acccu  -    ga   -   U        UC           u ug 
                     gc ccgg  ccc agU CAAGUAAU  AGGAUAGGUUg g  c
                     || ||||  ||| ||| ||||||||  ||||||||||| |   
                     cg ggcc  ggg UCG GUUCAUUA  UCUUGUCCgac c  u
gggagugggguuccgacgucc  u    gg   C   -        CC           - ug 

Annotation confidence Not enough data

Genome context

chr2: 110951723-110951830 [+]

Mature chi-miR-26b-5p

• Accession: MIMAT0036103
• Description: Capra hircus chi-miR-26b-5p mature miRNA
• Sequence: 19 - UUCAAGUAAUUCAGGAUAGGUU - 40
• Evidence: experimental ; Illumina [1]

Mature chi-miR-26b-3p

• Accession: MIMAT0036104
• Description: Capra hircus chi-miR-26b-3p mature miRNA
• Sequence: 54 - CCUGUUCUCCAUUACUUGGCUC - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40