miRBase entry: chi-mir-2284c

Stem-loop chi-mir-2284c


Accession
MI0030703
Description
Capra hircus chi-mir-2284c precursor miRNA
Gene family
MIPF0000747; mir-2284

Literature search
3 open access papers mention chi-mir-2284c
(5 sentences)

Sequence

cugggguagccaaaaaguucauuugguuuuuccuguaagauguuacagaAAAAUCUAAGUGAACUUUUUGGccaacucu
..(((((.((((((((((((((((((.((((.((((((....)))))).)))).))))))))))))))))))..)))))

Structure
cu     -a                  u    c      g 
  ggggu  gccaaaaaguucauuugg uuuu cuguaa a
  |||||  |||||||||||||||||| |||| ||||||  
  ucuca  cGGUUUUUCAAGUGAAUC AAAA gacauu u
--     ac                  U    a      g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr3: 55121573-55121651 [-]

Database links

Mature chi-miR-2284c

Accession MIMAT0036079
Description Capra hircus chi-miR-2284c mature miRNA
Sequence 50 - AAAAUCUAAGUGAACUUUUUGG - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40