miRBase entry: chi-mir-206

Stem-loop chi-mir-206


Accession
MI0030684
Description
Capra hircus chi-mir-206 precursor miRNA
Gene family
MIPF0000038; mir-1

Literature search
6 open access papers mention chi-mir-206
(22 sentences)

Sequence

ugcuucccaaggccacaugcuucuuuauauccccauacggauuacuuugcuaUGGAAUGUAAGGAAGUGUGUGGUuucggcgagcg
.((((.((.(((((((((((((((((((((..(((((((((....)))).))))).))))))))))))))))))))).)).)))).

Structure
u    c  a                     cc     -    u 
 gcuu cc aggccacaugcuucuuuauau  ccaua cgga u
 |||| || |||||||||||||||||||||  ||||| ||||  
 cgag gg uuUGGUGUGUGAAGGAAUGUA  GGUau guuu a
g    c  c                     -A     c    c 


Annotation confidence Not enough data
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Genome context
chr23: 25415849-25415934 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from chi-mir-206
Name Accession Chromosome Start End Strand Confidence




Database links

Mature chi-miR-206

Accession MIMAT0036052
Description Capra hircus chi-miR-206 mature miRNA
Sequence 53 - UGGAAUGUAAGGAAGUGUGUGGU - 75
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40