Stem-loop sequence chi-mir-204

Accession

MI0030683 (change log)

Description

Capra hircus miR-204 stem-loop

Gene family

MIPF0000042; mir-204

Literature search

3 open access papers mention chi-mir-204
(23 sentences)

Stem-loop

   ggcuacagucuuucuucau     ucg     u          a     u    gagaau 
5'                    gugac   uggac ucccuuuguc uccua gccu      a
                      |||||   ||||| |||||||||| ||||| ||||      u
3'                    uacug   acuug agggaaacgg agggu cgga      a
   ----------------cac     uua     c          a     -    ggaagu 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (CHIR_2.0; GCA_000317765.2): chr8: 47426384-47426489 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0030683

Mature sequence chi-miR-204-5p

• Accession: MIMAT0036050
• Sequence: 33 - uucccuuugucauccuaugccu - 54
• Evidence: experimental; Illumina [1]

Mature sequence chi-miR-204-3p

• Accession: MIMAT0036051
• Sequence: 72 - gcugggaaggcaaagggac - 90
• Evidence: experimental; Illumina [1]

References

1. PMID:23981187 "Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing" Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J Reprod Domest Anim. 49:32-40(2014).