Stem-loop chi-mir-204

Accession

MI0030683

Description

Capra hircus chi-mir-204 precursor miRNA

Gene family

MIPF0000042; mir-204

Literature search

3 open access papers mention chi-mir-204
(23 sentences)

Sequence

ggcuacagucuuucuucaugugacucguggacUUCCCUUUGUCAUCCUAUGCCUgagaauauaugaaggagGCUGGGAAGGCAAAGGGACguucaauugucaucac
(((....))).........(((((...(((((.((((((((((.(((((.((((...............))))))))).)))))))))).)))))...)))))...

Structure

ggcuacagucuuucuucau     ucg     U          A     U    gagaau 
                   gugac   uggac UCCCUUUGUC UCCUA GCCU      a
                   |||||   ||||| |||||||||| ||||| ||||      u
                   uacug   acuug AGGGAAACGG AGGGU CGga      a
----------------cac     uua     C          A     -    ggaagu 

Annotation confidence Not enough data

Genome context

chr8: 47426384-47426489 [-]

Mature chi-miR-204-5p

• Accession: MIMAT0036050
• Description: Capra hircus chi-miR-204-5p mature miRNA
• Sequence: 33 - UUCCCUUUGUCAUCCUAUGCCU - 54
• Evidence: experimental ; Illumina [1]

Mature chi-miR-204-3p

• Accession: MIMAT0036051
• Description: Capra hircus chi-miR-204-3p mature miRNA
• Sequence: 72 - GCUGGGAAGGCAAAGGGAC - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40