miRBase entry: chi-mir-187

Stem-loop chi-mir-187


Accession
MI0030658
Description
Capra hircus chi-mir-187 precursor miRNA
Gene family
MIPF0000078; mir-187

Literature search
2 open access papers mention chi-mir-187
(7 sentences)

Sequence

ggccgggcucccaacgacacggugugagaccucgggcuacaacacgggacccgggcgcugcuccgaccccUCGUGUCUUGUGUUGCAGCCggagggacgcagguccgca
.((.(((((.((........))((((...((((.((((.((((((((((((.(((((......)).)))...).))))))))))).)))).))))..))))))))))).

Structure
g  c     cccaacgacacgg    aga    g    a           - --c   -  cu 
 gc gggcu             ugug   ccuc ggcu caacacgggac c   ggg cg  g
 || |||||             ||||   |||| |||| ||||||||||| |   ||| ||   
 cg ccugg             acgc   ggag CCGA GUUGUGUUCUG G   ccc gc  c
a  -     -------------    -ag    g    C           U CUc   a  cu 


Annotation confidence Not enough data
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Genome context
chr24: 22729914-22730022 [+]

Database links

Mature chi-miR-187

Accession MIMAT0036012
Description Capra hircus chi-miR-187 mature miRNA
Sequence 71 - UCGUGUCUUGUGUUGCAGCC - 90
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40