Stem-loop sequence chi-mir-155

Accession

MI0030643 (change log)

Description

Capra hircus miR-155 stem-loop

Gene family

MIPF0000157; mir-155

Literature search

8 open access papers mention chi-mir-155
(16 sentences)

Stem-loop

   uugcugu  -       g  a          u    a        uuua c 
5'        gg gcugugu cu uuaaugcuaa cgug uagggguu    c u
          || ||||||| || |||||||||| |||| ||||||||    |  
3'        cc cgguacg ga aauuacgauu guac auccucag    g c
   -cauugu  g       g  c          -    -        -uca g 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (CHIR_2.0; GCA_000317765.2): chr1: 10688698-10688796 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0030643

Mature sequence chi-miR-155-5p

• Accession: MIMAT0035988
• Sequence: 21 - uuaaugcuaaucgugauaggggu - 43
• Evidence: experimental; Illumina [1]

Mature sequence chi-miR-155-3p

• Accession: MIMAT0035989
• Sequence: 60 - cuccuacauguuagcauuaaca - 81
• Evidence: experimental; Illumina [1]

References

1. PMID:23981187 "Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing" Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J Reprod Domest Anim. 49:32-40(2014).