Stem-loop chi-mir-153

Accession

MI0030640

Description

Capra hircus chi-mir-153 precursor miRNA

Gene family

MIPF0000050; mir-153

Sequence

ugucugucuccccucucugucuccucccucuucucucucucucacggcugccagcgucauuuuugugaucugcagcuaguauucucacuccagUUGCAUAGUCACAAAAGUGAUCacuggcagguguggccgcugca
.........................................(((((.(((((((.((((((((((((((.((((((((((......)))..)))))))..))))))))))))).).))))))).)))))........

Structure

ugucugucuccccucucugucuccucccucuucucucucuc     g       c -             -c       --   au 
                                         ucacg cugccag g ucauuuuugugau  ugcagcu  agu  u
                                         ||||| ||||||| | |||||||||||||  |||||||  |||   
                                         ggugu gacgguc C AGUGAAAACACUG  ACGUUga  uca  c
---------------------------------acgucgcc     g       a U             AU       cc   cu 

Annotation confidence Not enough data

Genome context

chr2: 111832063-111832199 [-]

Mature chi-miR-153

• Accession: MIMAT0035983
• Description: Capra hircus chi-miR-153 mature miRNA
• Sequence: 94 - UUGCAUAGUCACAAAAGUGAUC - 115
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40