miRBase entry: chi-mir-147

Stem-loop chi-mir-147


Accession
MI0030635
Description
Capra hircus chi-mir-147 precursor miRNA
Gene family
MIPF0000105; mir-147


Sequence

uacucuaugaaucuagUGGAAACACUUCUGCACAAACUagauuauggauaccaGUGUGCGGAAAUGCUUCUgcuacauuuuuagggc
..(((((.((((.((((((((.((.(((((((((......(((...))).....))))))))).)).)))))))).)))).))))).

Structure
ua     u    c        A  C         AACUag   a 
  cucua gaau uagUGGAA CA UUCUGCACA      auu  
  ||||| |||| |||||||| || |||||||||      ||| u
  gggau uuua aucgUCUU GU AAGGCGUGU      uag  
-c     u    c        C  A         -Gacca   g 


Annotation confidence Not enough data
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Genome context
chr10: 64061808-64061894 [-]

Database links

Mature chi-miR-147-5p

Accession MIMAT0035974
Description Capra hircus chi-miR-147-5p mature miRNA
Sequence 17 - UGGAAACACUUCUGCACAAACU - 38
Evidence experimental
Illumina [1]

Mature chi-miR-147-3p

Accession MIMAT0035975
Description Capra hircus chi-miR-147-3p mature miRNA
Sequence 54 - GUGUGCGGAAAUGCUUCU - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40