miRBase entry: chi-mir-1296

Stem-loop chi-mir-1296


Accession
MI0030613
Description
Capra hircus chi-mir-1296 precursor miRNA
Gene family
MIPF0000649; mir-1296


Sequence

ccuaccuaacugggUUAGGGCCCUGGCUCCAUCUCCuuuaggaaaaccuucuguggggaguggggcuuugacccuaaccuagcugggcuguaacacugcugcauuu
....((((.(((((((((((....(((((((.((((((..((((....))))..)))))))))))))....))))))))))).)))).((((.......))))...

Structure
---------------ccua    a           CCCU       U      ua    a 
                   ccua cugggUUAGGG    GGCUCCA CUCCuu  ggaa a
                   |||| |||||||||||    ||||||| ||||||  ||||  
                   gggu gauccaauccc    ucggggu gagggg  ucuu c
uuuacgucgucacaauguc    c           aguu       -      ug    c 


Annotation confidence Not enough data
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Genome context
chr28: 18831232-18831337 [-]

Database links

Mature chi-miR-1296

Accession MIMAT0035938
Description Capra hircus chi-miR-1296 mature miRNA
Sequence 15 - UUAGGGCCCUGGCUCCAUCUCC - 36
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40