miRBase entry: chi-mir-1271

Stem-loop chi-mir-1271


Accession
MI0030609
Description
Capra hircus chi-mir-1271 precursor miRNA
Gene family
MIPF0000483; mir-1271


Sequence

cagcacccagaucagugCUUGGCACCUAGUAAGUACUcaguauauacuuguugAGUGCCUGCUAUGUGCCAGGcauugugcugagggcuuuggggggauccagag
..((.(((((..(((((((((((((.(((((.((((((((((......)))))))))).))))).)))))))))))))..))).))))((((((....)))))).

Structure
---------------ca  a  -   au             C     A          ua 
                 gc cc cag  cagugCUUGGCAC UAGUA GUACUcagua  u
                 || || |||  ||||||||||||| ||||| ||||||||||   
                 cg gg guc  guuacGGACCGUG AUCGU CGUGAguugu  a
gagaccuagggggguuu  -  a   gu             U     C          uc 


Annotation confidence Not enough data
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Genome context
chr7: 36811795-36811899 [+]

Database links

Mature chi-miR-1271-5p

Accession MIMAT0035931
Description Capra hircus chi-miR-1271-5p mature miRNA
Sequence 18 - CUUGGCACCUAGUAAGUACU - 37
Evidence experimental
Illumina [1]

Mature chi-miR-1271-3p

Accession MIMAT0035932
Description Capra hircus chi-miR-1271-3p mature miRNA
Sequence 54 - AGUGCCUGCUAUGUGCCAGG - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40