Stem-loop sequence chi-mir-126

Accession

MI0030607 (change log)

Description

Capra hircus miR-126 stem-loop

Gene family

MIPF0000115; mir-126

Literature search

5 open access papers mention chi-mir-126
(11 sentences)

Stem-loop

   g   g      - a           u       c cug   c 
5'  cug ugacgg g cauuauuacuu ugguacg g   uga a
    ||| |||||| | ||||||||||| ||||||| |   |||  
3'  gac acugcc c guaauaaugag gccaugc c   acu c
   -   g      g -           u       u -aa   u 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (CHIR_2.0; GCA_000317765.2): chr11: 107845630-107845711 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0030607

Mature sequence chi-miR-126-5p

• Accession: MIMAT0035927
• Sequence: 14 - cauuauuacuuuugguacgcgc - 35
• Evidence: experimental; Illumina [1]

Mature sequence chi-miR-126-3p

• Accession: MIMAT0035928
• Sequence: 51 - ucguaccgugaguaauaaugc - 71
• Evidence: experimental; Illumina [1]

References

1. PMID:23981187 "Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing" Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J Reprod Domest Anim. 49:32-40(2014).