Stem-loop sequence chi-mir-125b

Accession

MI0030606 (change log)

Description

Capra hircus miR-125b stem-loop

Gene family

MIPF0000033; mir-10

Literature search

10 open access papers mention chi-mir-125b
(24 sentences)

Stem-loop

   ga   uu     uc  ug   c   a        -gg   u 
5'   cuu  ccuag  cc  aga ccu acuuguga   uau u
     |||  |||||  ||  ||| ||| ||||||||   |||  
3'   gag  ggauc  gg  ucu gga ugaacacu   aug u
   gg   gc     ca  gu   c   c        aca   a 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (CHIR_2.0; GCA_000317765.2): chr1: 20759329-20759411 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0030606

Mature sequence chi-miR-125b-5p

• Accession: MIMAT0035925
• Sequence: 13 - ucccugagacccuaacuugu - 32
• Evidence: experimental; Illumina [1]

Mature sequence chi-miR-125b-3p

• Accession: MIMAT0035926
• Sequence: 52 - acaagucaggcucuugggacc - 72
• Evidence: experimental; Illumina [1]

References

1. PMID:23981187 "Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing" Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J Reprod Domest Anim. 49:32-40(2014).