miRBase entry: chi-mir-1249

Stem-loop chi-mir-1249


Accession
MI0030603
Description
Capra hircus chi-mir-1249 precursor miRNA
Gene family
MIPF0000667; mir-1249

Literature search
1 open access papers mention chi-mir-1249
(1 sentences)

Sequence

uccucagauucuuguuugcauggggaggagggaggagaugggccacguucccucugccuggaACGCCCUUCCCCCCCUUCUUCAccuagcgaacuccuacucguccuucaagac
.............((((((..(((((((((((.((.((.((((...(((((........))))))))).)).))))))))))).))..))))))........(((......)))

Structure
-------uccucagauucuu      au  -         a  a  u    cac     cuc 
                    guuugc  gg ggaggaggg gg ga gggc   guucc   u
                    ||||||  || ||||||||| || || ||||   |||||    
                    caagcg  cc CUUCUUCCC CC CU CCCG   CAagg   g
cagaacuuccugcucauccu      au  A         -  C  U    ---     ucc 


Annotation confidence Not enough data
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Genome context
AJPT02057647.1: 77-190 [+]

Database links

Mature chi-miR-1249

Accession MIMAT0035921
Description Capra hircus chi-miR-1249 mature miRNA
Sequence 63 - ACGCCCUUCCCCCCCUUCUUCA - 84
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40