miRBase entry: chi-mir-1248

Stem-loop chi-mir-1248


Accession
MI0030602
Description
Capra hircus chi-mir-1248 precursor miRNA
Gene family
MIPF0000622; mir-1248

Literature search
1 open access papers mention chi-mir-1248
(1 sentences)

Sequence

uuuACCUUCUUGUAUAAGCACUGugcuaaaauuacagaaaccaagauaacuuugguuuuugugauaaugcuagcagaguauuaaacaagaagaagaggaacugca
.....((((((((.(((..(((.(((((..(((((((((((((((.....))))))))))))))).....))))).))).))).)))))))).............

Structure
--------uuuAC        A   GC   G     ---aa               a 
             CUUCUUGU UAA  ACU ugcua     auuacagaaaccaag u
             |||||||| |||  ||| |||||     ||||||||||||||| a
             gaagaaca auu  uga acgau     uaguguuuuugguuu a
acgucaaggagaa        a   -a   g     cguaa               c 


Annotation confidence Not enough data
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Genome context
chr1: 82475089-82475193 [-]

Database links

Mature chi-miR-1248-5p

Accession MIMAT0035920
Description Capra hircus chi-miR-1248-5p mature miRNA
Sequence 4 - ACCUUCUUGUAUAAGCACUG - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40