miRBase entry: chi-mir-105a

Stem-loop chi-mir-105a


Accession
MI0030591
Description
Capra hircus chi-mir-105a precursor miRNA
Gene family
MIPF0000074; mir-105


Sequence

ugugcaucguagUCAAAUGCUCAGACUCCUGUGGuggcugcucaugcaccacggauguuugagcaugugcuacggugucua
...(((((((((.((.((((((((((..((((((((..........))))))))..)))))))))).)))))))))))...

Structure
ugu         U  A          UC        gcug 
   gcaucguag CA AUGCUCAGAC  CUGUGGug    c
   ||||||||| || ||||||||||  ||||||||     
   uguggcauc gu uacgaguuug  ggcaccac    u
auc         -  g          ua        guac 


Annotation confidence Not enough data
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Genome context
chrX: 56903737-56903817 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from chi-mir-105a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature chi-miR-105a

Accession MIMAT0035903
Description Capra hircus chi-miR-105a mature miRNA
Sequence 13 - UCAAAUGCUCAGACUCCUGUGG - 34
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23981187
    Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
    "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
    "Reprod Domest Anim (2014) 49:32-40