Stem-loop chi-mir-101

Accession

MI0030589

Description

Capra hircus chi-mir-101 precursor miRNA

Gene family

MIPF0000046; mir-101

Literature search

2 open access papers mention chi-mir-101
(4 sentences)

Sequence

aggcugcccuggcUCAGUUAUCACAGUGCUGAUGCuguccauucuaaaggUACAGUACUGUGAUAACUGAaggauggcagcca
.(((((((.....((((((((((((((((((.((((............)))))))))))))))))))))).....))))))).

Structure

a       cuggc                  A    gucca 
 ggcugcc     UCAGUUAUCACAGUGCUG UGCu     u
 |||||||     |||||||||||||||||| ||||      
 ccgacgg     AGUCAAUAGUGUCAUGAC AUgg     u
a       uagga                  -    aaauc 

Annotation confidence Not enough data

Genome context

chr3: 81377563-81377645 [+]

Mature chi-miR-101-5p

• Accession: MIMAT0035899
• Description: Capra hircus chi-miR-101-5p mature miRNA
• Sequence: 14 - UCAGUUAUCACAGUGCUGAUGC - 35
• Evidence: experimental ; Illumina [1]

Mature chi-miR-101-3p

• Accession: MIMAT0035900
• Description: Capra hircus chi-miR-101-3p mature miRNA
• Sequence: 51 - UACAGUACUGUGAUAACUGA - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23981187
   Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing
   "Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J"
   "Reprod Domest Anim (2014) 49:32-40