Stem-loop sequence chi-let-7b

AccessionMI0030580 (change log)
DescriptionCapra hircus let-7b stem-loop
Gene family MIPF0000002; let-7
Literature search

15 open access papers mention chi-let-7b
(51 sentences)

Stem-loop 
   ----   -----    u                     ucaggguagugaug 
5'     ggc     gggg gagguaguagguugugugguu              u
       |||     |||| |||||||||||||||||||||              u
3'     ccg     uucc uuccgucauccaacauaucaa              g
   ugac   gggag    -                     uagaaggcuccccc
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (CHIR_2.0; GCA_000317765.2) Overlapping transcripts
chr5: 118522775-118522871 [+]
intergenic
Clustered miRNAs
< 10kb from chi-let-7b
chi-let-7achr5: 118521992-118522097 [+]
chi-let-7bchr5: 118522775-118522871 [+]
Database links

Mature sequence chi-let-7b-5p

Accession MIMAT0035882
Sequence

8 -  

ugagguaguagguugugugguu

 - 29

Get sequence
Evidence experimental; Illumina [1]

Mature sequence chi-let-7b-3p

Accession MIMAT0035883
Sequence

63 -  

cuauacaaccuacugccuuccu

 - 84

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:23981187 "Identification of conservative microRNAs in Saanen dairy goat testis through deep sequencing" Wu J, Zhu H, Song W, Li M, Liu C, Li N, Tang F, Mu H, Liao M, Li X, Guan W, Li X, Hua J Reprod Domest Anim. 49:32-40(2014).