miRBase entry: hvu-MIR156b

Stem-loop hvu-MIR156b


Accession
MI0030546
Description
Hordeum vulgare hvu-MIR156b precursor miRNA
Gene family
MIPF0000008; MIR156

Literature search
18 open access papers mention hvu-MIR156b
(166 sentences)

Sequence

gcUGACAGAAGAGAGUGAGCACAcagcggcaggcugcgucugauaaagaggacggauggaugcgaagagagagagauagacgcagcugcuguugcgugcucacccucucucugucagc
(((((((((((((.((((((((.(((((((((.(((((((((..........((........))............)))))))))))))))))).)))))))).)))).)))))))))

Structure
         -    A        A         g         --auaaagagga  gau 
gcUGACAGA AGAG GUGAGCAC cagcggcag cugcgucug            cg   g
||||||||| |||| |||||||| ||||||||| |||||||||            ||    
cgacugucu ucuc cacucgug guugucguc gacgcagau            gc   g
         c    c        c         -         agagagagagaa  gua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature hvu-miR156b

Accession MIMAT0035815
Description Hordeum vulgare hvu-miR156b mature miRNA
Sequence 3 - UGACAGAAGAGAGUGAGCACA - 23
Evidence experimental
Northern [1]

References

  1. PubMed ID: 23324356
    Developmentally regulated expression and complex processing of barley pri-microRNAs
    Kruszka K, Pacak A, Swida-Barteczka A, Stefaniak AK, Kaja E, Sierocka I, Karlowski W, Jarmolowski A, Szweykowska-Kulinska Z
    BMC Genomics (2013) 14:34