miRBase entry: tae-MIR9666b

Stem-loop tae-MIR9666b


Accession
MI0030421
Description
Triticum aestivum tae-MIR9666b precursor miRNA
Gene family
MIPF0001930; MIR9666

Literature search
2 open access papers mention tae-MIR9666b
(4 sentences)

Sequence

88713 reads, 488 reads per million, 116 experiments
ucauucggauucGCCAUCAUACGUCCAACCGUGcauuugauaugcauauauaugcaucacgagccaCGGUUGGGCUGUAUGAUGGCGAuaccgauugg
.((.((((..(((((((((((((((((((((((..((((..((((((....))))))..)))).))))))))))).))))))))))))..)))).)).

Structure
u  u    au            -           ca    au      a 
 ca ucgg  ucGCCAUCAUAC GUCCAACCGUG  uuug  augcau u
 || ||||  |||||||||||| |||||||||||  ||||  ||||||  
 gu agcc  AGCGGUAGUAUG CGGGUUGGCac  gagc  uacgua a
g  u    au            U           -c    ac      u 


Annotation confidence High
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Genome context
2A: 251249264-251249361 [-]

Database links

Mature tae-miR9666b-5p

Accession MIMAT0035812
Description Triticum aestivum tae-miR9666b-5p mature miRNA
Sequence 13 - GCCAUCAUACGUCCAACCGUG - 33
Evidence experimental
Illumina [1]

Mature tae-miR9666b-3p

Accession MIMAT0035813
Description Triticum aestivum tae-miR9666b-3p mature miRNA
Sequence 67 - CGGUUGGGCUGUAUGAUGGCGA - 88
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24734873
    Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)
    Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H
    BMC Genomics (2014) 15:289