Stem-loop tae-MIR1122c

Accession

MI0030398

Description

Triticum aestivum tae-MIR1122c precursor miRNA

Gene family

MIPF0000443; MIR1120

Literature search

8 open access papers mention tae-MIR1122c
(41 sentences)

Sequence

10704 reads, 107 reads per million, 116 experiments

gugaacuacucucuccaucccauaauguaagacguuuuugcaaacuauauuagcuugcaaaaacgUCUAAUAUUAUGGGACGGAGGgaguaguaca
.((.((((((((((((.(((((((((((.((((((((((((((.(((...))).)))))))))))))).))))))))))).)))))))))))).))

Structure

g  a            a           a              a   u 
 ug acuacucucucc ucccauaaugu agacguuuuugcaa cua  
 || |||||||||||| ||||||||||| |||||||||||||| ||| a
 ac ugaugagGGAGG AGGGUAUUAUA UCUgcaaaaacguu gau  
-  a            C           A              c   u 

Annotation confidence Not enough data

Genome context

3D: 86881594-86881689 [+]

Mature tae-miR1122c-3p

• Accession: MIMAT0035788
• Description: Triticum aestivum tae-miR1122c-3p mature miRNA
• Sequence: 66 - UCUAAUAUUAUGGGACGGAGG - 86
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24734873
   Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)
   Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H
   BMC Genomics (2014) 15:289