Stem-loop sequence tae-MIR9666c

Accession

MI0030394 (change log)

Description

Triticum aestivum miR9666c stem-loop

Gene family

MIPF0001930; MIR9666

Literature search

2 open access papers mention tae-MIR9666c
(4 sentences)

Stem-loop

   au    au             u         ca    au      a 
5'   ucgg  ucgccaucauacg ccaaccgug  uuug  augcau u
     ||||  ||||||||||||| |||||||||  ||||  ||||||  
3'   agcc  agcgguaguaugu gguuggcac  gagc  uacgua a
   uu    au             c         -c    gc      u 

Deep sequencing

1541 reads, 0.862 reads per million, 116 experiments

Confidence

Annotation confidence: high

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Database links

• miRBase Tracker:MI0030394

Mature sequence tae-miR9666c-5p

• Accession: MIMAT0035784
• Sequence: 11 - gccaucauacguccaaccgug - 31
• Deep sequencing: 1130 reads, 116 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:24734873 "Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)" Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H BMC Genomics. 15:289(2014).