Stem-loop sequence tae-MIR9654a

Accession

MI0030371 (change log)

Description

Triticum aestivum miR9654a stem-loop

Gene family

MIPF0001980; MIR9654

Literature search

2 open access papers mention tae-MIR9654a
(15 sentences)

Stem-loop

   -   ac                    g        g           gga  u 
5'  ugc  guugguucgcuucaagccuu uggaauag guagacugcau   gc a
    |||  |||||||||||||||||||| |||||||| |||||||||||   || u
3'  acg  caauuaagcgaaguucggaa gucuuauc cauuugacgug   cg g
   u   au                    a        a           --a  u 

Deep sequencing

5694 reads, 0 reads per million, 116 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates: 3B: 773196382-773196487 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0030371

Mature sequence tae-miR9654a-3p

• Accession: MIMAT0035761
• Sequence: 75 - uucugaaaggcuugaagcgaau - 96
• Deep sequencing: 4523 reads, 116 experiments
• Evidence: experimental; Illumina [1]

References

1. PMID:24734873 "Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)" Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H BMC Genomics. 15:289(2014).